Description of Corynebacterium nasorum sp. nov. and Corynebacterium hallucis sp. nov. isolated from human nasal passages and skin

Authors

Tommy Tran

Isabel Fernandez Escapa

Published

August 11, 2025

Introduction

This repository includes the code used for bioinformatics and data analysis for the manuscript “Description of Corynebacterium nasorum sp. nov. and Corynebacterium hallucis sp. nov. isolated from human nasal passages and skin”.

A preprint of this manuscript is available at bioRxiv.

  • Code used to recover summary information for the included genomes from NCBI can be found here, with code for the corresponding custom Prokka annotations in here. With the supplemental files used to list genomes included in each section of the analysis here.

  • Detailed code is also included for the ANI and dDDH analysis.

  • All the code used for construction of phylogenetic and phylogenomic trees is summarized here.

  • Analysis performed using Anvio is documented in here.